PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_196213g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 250aa    MW: 27816 Da    PI: 4.791
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_196213g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.6e-05142165830
                     HHHHHHHHHHHHHHHHHCTSCC.C CS
             HLH   8 rErrRRdriNsafeeLrellPk.a 30 
                      Er+RR ++++ + +Lr+++Pk +
  MA_196213g0010 142 TERKRRTKLKETLYKLRSVVPKiS 165
                     6********************955 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.3E-5131165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.34E-6134177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.42134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.64E-4143169No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MDFAAFGFDC VTEMCNSNKS EINQYSNGND FGHGFHLPDM SNIGSAGLYE SFSGQASSYS  60
EPKTVESQTD QNPAISVCSE DTAMDHQNSE LWMDMDENSR QLERDDNDPQ IIGSNPSTKT  120
YNSGGPVVQR QQQRQTSKNL YTERKRRTKL KETLYKLRSV VPKISKVDIC NVGEEGIYHV  180
RIESKKEAGG LVKLTRALES LPLHIMNSNI CCFDEAILST VTLNASSMEI GGADKLEDMI  240
RQSISSAWMG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LRN63e-32B8LRN6_PICSI; Putative uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5571678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.13e-09bHLH family protein